Bibliography Table
This format is the same bibliography data as bibliography
| Year | Type | Authors | Title | Venue | DOI |
|---|---|---|---|---|---|
| 2026 | Proceedings | Keith Currier, Wilmer Leal, George Rauta, Austin Copeland, Warren Dixon, James Fairbanks | Whitney Control Barrier Functions: A Mesh-based Geometric approach via Discrete Exterior Calculus | submitted | |
| 2026 | Proceedings | Tyler Hanks, Cristian Nino, Joana Bou Barcelo, Austin Copeland, Warren Dixon, James Fairbanks | Heterogeneous Multi-agent multi-target tracking using cellular sheaves | submitted | |
| 2026 | Proceedings | Y Zhao, Tyler Hanks, Hans Riess, Samuel Cohen, Matthew Hale, James Fairbanks | Asynchronous nonlinear sheaf diffusion for mult-agent coordiantion | accepted | |
| 2025 | Presentation | Kevin Carlson | Multigrid Methods for Structure Preserving Discretizations | 22ND Copper Mountain Conference on Multigrid Methods (Copper Mountain, CO) | |
| 2025 | Presentation | James Fairbanks, Evan Patterson | Compositional Development of Compositional Mathematics | Applied Category Theory (Gainesville, FL) | |
| 2025 | Presentation | James Fairbanks | Modeling with ACT for Compositional Decision Making | American Control Conference (Denver, CO) | |
| 2025 | Proceedings | Tyler Hanks, Hans Riess, Samuel Cohen, Trevor Gross, Matthew Hale, James Fairbanks | Distributed Multi-agent Coordination over Cellular Sheaves | IEEE Conference on Decision and Control | DOI |
| 2025 | Proceedings | Mason Lary, Richard Samuelson, Alexander Wilentz, Alina Zare, Matthew Klawonn, James Fairbanks | Learning diagrams: a graphical language for compositional training regimes | The thirteenth international conference on learning representations | |
| 2024 | Proceedings | Owen Lynch, Kris Brown, James Fairbanks, Evan Patterson | GATlab: Modeling and Programming with Generalized Algebraic Theories | Electronic Notes in Theoretical Informatics and Computer Science | |
| 2024 | Proceedings | Tyler Hanks, Matthew Klawonn, James Fairbanks | Generalized Gradient Descent is a Hypergraph Functor | DOI | |
| 2024 | Article | Benjamin Merlin Bumpus, James Fairbanks, Fabrizio Genovese, Caterina Puca, Daniel Rosiak | How nice is this functor? Two squares and some homology go a long way | Proceedings of Applied Category Theory | |
| 2024 | Article | Rebekah Aduddell, James Fairbanks, Amit Kumar, Pablo S. Ocal, Evan Patterson, Brandon T. Shapiro | A compositional account of motifs, mechanisms, and dynamics in biochemical regulatory networks | Compositionality | DOI |
| 2024 | Tyler Hanks, Matthew Klawonn, Evan Patterson, Matthew Hale, James Fairbanks | A Compositional Framework for First-Order Optimization | DOI | ||
| 2024 | Article | Kevin Arlin, James Fairbanks, Tim Hosgood, Evan Patterson | The diagrammatic presentation of equations in categories | arXiv preprint arXiv:2401.09751 | |
| 2024 | Benjamin Merlin Bumpus, James Fairbanks, Will J. Turner | Pushing Tree Decompositions Forward Along Graph Homomorphisms | DOI | ||
| 2024 | Proceedings | Tyler Hanks, Baike She, Matthew Hale, Evan Patterson, Matthew Klawonn, James Fairbanks | Modeling Model Predictive Control: A Category Theoretic Framework for Multistage Control Problems | 2024 American Control Conference (ACC) | DOI |
| 2024 | Benjamin Merlin Bumpus, James Fairbanks, Martti Karvonen, Wilmer Leal, Frédéric Simard | Towards a Unified Theory of Time-Varying Data | DOI | ||
| 2024 | Presentation | James P Fairbanks, Rebekah Aduddell, Amit Kumar, Pablo S Ocal, Evan Patterson, Brandon T Shapiro | A compositional account of motifs, mechanisms, and dynamics in biochemical regulatory networks | AMS Southeastern Sectional Meeting (Tallahassee, FL) | |
| 2024 | Article | Benjamin Merlin Bumpus, Matteo Capucci, James Fairbanks, Daniel Rosiak | Failures of compositionality: a short note on cohomology, sheafification and lavish presheaves | arXiv preprint arXiv:2407.03488 | |
| 2024 | Article | Luke Morris, Andrew Baas, Jesus Arias, Maia Gatlin, Evan Patterson, James P. Fairbanks | Decapodes: A diagrammatic tool for representing, composing, and computing spatialized partial differential equations | Journal of Computational Science | DOI |
| 2023 | Presentation | James P Fairbanks, Owen Lynch | Computational category theory in applied mathematics | Joint Mathematics Meetings (Boston, MA) | |
| 2023 | Presentation | Rebekah Aduddell, Pablo S Ocal, James P Fairbanks, Evan Patterson, Brandon Shapiro, Amit Kumar | A categorical framework for (gene) regulatory networks | Joint Mathematics Meeting (Boston, MA) | |
| 2023 | Ernst Althaus, Benjamin Merlin Bumpus, James Fairbanks, Daniel Rosiak | Compositional Algorithms on Compositional Data: Deciding Sheaves on Presheaves | DOI | ||
| 2023 | Proceedings | Angeline Aguinaldo, Evan Patterson, James Fairbanks, William Regli, Jaime Ruiz | A Categorical Representation Language and Computational System for Knowledge-Based Robotic Task Planning [Best Paper Award] | Proceedings of the AAAI Symposium Series | DOI |
| 2023 | Proceedings | Baike She, Tyler Hanks, James Fairbanks, Matthew Hale | Characterizing Compositionality of LQR from the Categorical Perspective | 2023 62nd IEEE Conference on Decision and Control (CDC) | DOI |
| 2023 | Article | Kristopher Brown, Evan Patterson, Tyler Hanks, James Fairbanks | Computational category-theoretic rewriting | Journal of Logical and Algebraic Methods in Programming | DOI |
| 2023 | Article | Robert K Garrett, James P Fairbanks, Margaret L Loper, James D Moreland | The application of applied category theory to quantify mission success | Simulation | |
| 2023 | Article | Evan Patterson, Andrew Baas, Timothy Hosgood, James Fairbanks | A diagrammatic view of differential equations in physics | Mathematics in Engineering | DOI |
| 2022 | Proceedings | Kristopher Brown, Evan Patterson, Tyler Hanks, James Fairbanks | Computational Category-Theoretic Rewriting [Best Paper] | Graph Transformation: 15th International Conference, ICGT 2022, Held as Part of STAF 2022, Nantes, France, July 7–8, 2022, Proceedings | DOI |
| 2022 | Proceedings | Kristopher Brown, Tyler Hanks, James Fairbanks | Compositional Exploration of Combinatorial Scientific Models | DOI | |
| 2022 | Article | Sophie Libkind, Andrew Baas, Micah Halter, Evan Patterson, James P. Fairbanks | An algebraic framework for structured epidemic modelling | Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences | DOI |
| 2022 | Presentation | Evan Patterson, Timothy Hosgood, Andrew Baas, James Fairbanks | Diagrammatic differential equations: Formal categorical framework and applications to multiphysics simulation | Applied Category Theory (Glasgow, UK) | DOI |
| 2022 | Presentation | Sean L Wu, Sophie Libkind, Kristopher Brown, Evan Patterson, James Fairbanks | Individual. jl: Rewriting individual-based models for epidemiology using graph rewriting | Applied Category Theory (Glasgow, UK) | |
| 2022 | Article | Evan Patterson, Owen Lynch, James Fairbanks | Categorical Data Structures for Technical Computing | Compositionality | DOI |
| 2022 | Proceedings | Sophie Libkind, Andrew Baas, Micah Halter, Evan Patterson, James Fairbanks | Typed and stratified models with slice categories | Applied Category Theory | |
| 2022 | Article | Sophie Libkind, Andrew Baas, Evan Patterson, James Fairbanks | Operadic Modeling of Dynamical Systems: Mathematics and Computation | Electronic Proceedings in Theoretical Computer Science | DOI |
| 2021 | Presentation | Owen Lynch, Evan Patterson, James Fairbanks | Shaped data with acsets | JuliaCon (Virtual) | |
| 2021 | Presentation | Sophie Libkind, James Fairbanks | AlgebraicDynamics: Compositional dynamical systems | JuliaCon (Virtual) | |
| 2021 | Presentation | Matthew Jackson, Micah Halter, Trevor Goodyear, Brian O’Donnell, James Fairbanks | Accelerating automatic target recognition performance evaluation with a relational database | Tri-Service Radar Symposium | |
| 2021 | Presentation | Julian Perez, Andrew Baas, Meghan C. Ferrall-Fairbanks, Manu O. Platt, James P. Fairbanks | Parameter estimation by minimizing the loss with respect to a finite difference approximation on the vector field | Biomedical Engineering Society Annual Meeting (Orlando, FL) | |
| 2021 | Presentation | Owen Lynch, James P. Fairbanks, Evan Patterson | Graphical semantic modeling with semagrams.jl | Applied Category Theory (Cambridge, UK) | |
| 2021 | Article | Yaniv Mordecai, James P Fairbanks, Edward F Crawley | Category-theoretic formulation of the model-based systems architecting cognitive-computational cycle | Applied Sciences | |
| 2020 | Proceedings | James P. Fairbanks, Natalie Fitch, Franklin Bradfield, Erica Briscoe | Credibility Development with Knowledge Graphs | Lecture Notes in Computer Science | DOI |
| 2020 | Article | Erica Briscoe, James Fairbanks | Artificial scientific intelligence and its impact on national security and foreign policy | Orbis | |
| 2020 | Proceedings | Micah Halter, Evan Patterson, Andrew Baas, James Fairbanks | Compositional Scientific Computing with Catlab and SemanticModels | ||
| 2020 | Proceedings | Micah Halter, Sreenath Raparti, Kun Cao, Christine Herlihy, James Fairbanks | SemanticModels. jl: a julia package for scientific model augmentation | Proceedings of the JuliaCon conferences | |
| 2019 | Article | Molly Nadolski, James Fairbanks | Complex systems analysis of hybrid warfare | Procedia Computer Science | DOI |
| 2019 | Proceedings | Kun Cao, James Fairbanks | Unsupervised Construction of Knowledge Graphs From Text and Code | SIGKDD Conference on Knowledge Discovery and Data Mining International Workshop on Mining and Learning with Graphs | |
| 2019 | Article | Micah Halter, Christine Herlihy, James Fairbanks | A compositional framework for scientific model augmentation | arXiv preprint arXiv:1907.03536 | |
| 2019 | Presentation | James P. Fairbanks | Semantic model understanding for scientific model augmentation | Systems Biology of Human Disease, (Berlin, DE) | |
| 2019 | Presentation | Christine Herlihy, James Fairbanks | semanticmodels.jl: Not just another modeling framework | JuliaCon (Baltimore, MD) | |
| 2019 | Article | Christine Herlihy, Kun Cao, Sreenath Reparti, Erica Briscoe, James Fairbanks | Semantic Program Analysis for Scientific Model Augmentation | Modeling the World’s Systems | |
| 2018 | Presentation | Mathieu Besançon, James Fairbanks | Graph interfaces: Bespoke graphs for every occasion | JuliaCon (London, UK) | |
| 2018 | Proceedings | Eisha Nathan, James Fairbanks, David Bader | Ranking in dynamic graphs using exponential centrality | Complex networks & their applications VI: Proceedings of complex networks 2017 (the sixth international conference on complex networks and their applications) | |
| 2018 | Proceedings | James P Fairbanks, Natalie Fitch, Nathan Knauf, Erica Briscoe | Credibility Assessment in the News: Do We Need to Read? | WSDM/MIS2 | |
| 2018 | Proceedings | Nigel Campbell, Trevor Goodyear, Winston Messer, Evan Stuart, James Fairbanks | Digital Witness: Remote Method for Volunteering Digital Evidence on Mobile Devices | 2018 IEEE International Symposium on Technologies for Homeland Security (HST) | DOI |
| 2018 | Presentation | James Fairbanks | The JuliaGraphs ecosystem: Move fast and don't break things | JuliaCon (London, UK) | |
| 2018 | Proceedings | Rohit Varkey Thankachan, Brian P Swenson, James P Fairbanks | Performance effects of dynamic graph data structures in community detection algorithms | 2018 IEEE high performance extreme computing conference (HPEC) | |
| 2017 | Presentation | James P. Fairbanks | QueryGarden: growing healthy applications in well prepared SQL | OHDSI Symposium (New York, NY) | |
| 2017 | Presentation | C. S. Brown, Jonathan Duke, James P. Fairbanks, Christine Herlihy, K. Mukadam, Jason Poovey, Melissa Rost | Implementing real-time patient level predictions using PLP models | OHDSI Symposium | |
| 2017 | Article | James P Fairbanks, David A Bader, Geoffrey D Sanders | Spectral partitioning with blends of eigenvectors | Journal of Complex Networks | |
| 2017 | Proceedings | David Ediger, James P. Fairbanks | Deriving Streaming Graph Algorithms from Static Definitions | 2017 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW) | DOI |
| 2017 | Article | Eisha Nathan, Geoffrey Sanders, James Fairbanks, Van Emden Henson, David A. Bader | Graph Ranking Guarantees for Numerical Approximations to Katz Centrality | Procedia Computer Science | DOI |
| 2017 | Proceedings | James Fairbanks, Rohit Varkey Thankachan, Eric Hein, Brian Swenson | Integrating productivity-oriented programming languages with high-performance data structures | 2017 IEEE high performance extreme computing conference (HPEC) | |
| 2017 | Presentation | T Frederick, C Herlihy, James Fairbanks | Using big data to predict and analyze cooperation and conflict | The Conflict Conference (University of Texas, Austin, TX) | |
| 2017 | Presentation | Seth Bromberger, James Fairbanks | LightGraphs: Our network, our story | JuliaCon (Berkeley, CA) | |
| 2017 | Presentation | James Fairbanks, N Knauf, N Fitch, C Herlihy, E Briscoe | Assessing credibility in the global news media | ||
| 2016 | Proceedings | David Bader, Aleksandra Michalewicz, Oded Green, Jessie Birkett-Rees, Jason Riedy, James Fairbanks, Anita Zakrzewska | Semantic database applications at the samtavro cemetery, georgia | The 44th Computer Applications and Quantitative Methods in Archaeology Conference (CAA) | |
| 2016 | Proceedings | Anita Zakrzewska, Eisha Nathan, James Fairbanks, David A Bader | A local measure of community change in dynamic graphs | 2016 IEEE/ACM international conference on advances in social networks analysis and mining (ASONAM) | |
| 2016 | Proceedings | James P Fairbanks, Anita Zakrzewska, David A Bader | New stopping criteria for spectral partitioning | 2016 IEEE/ACM international conference on advances in social networks analysis and mining (ASONAM) | |
| 2015 | Presentation | James Fairbanks, Geoff Sanders | Discovering block structure in graphs with approximate eigenvectors | SIAM Computational Science and Engineering (Salt Lake City, UT) | |
| 2015 | Article | James P Fairbanks, Ramakrishnan Kannan, Haesun Park, David A Bader | Behavioral clusters in dynamic graphs | Parallel Computing | |
| 2015 | Presentation | James P. Fairbanks | Discovering block structure with approximate eigenvectors | SIAM Computational Science and Engineering | |
| 2013 | Proceedings | James Fairbanks, David Ediger, Rob McColl, David A. Bader, Eric Gilbert | A statistical framework for streaming graph analysis | 2013 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining (ASONAM 2013) | DOI |
| 2012 | Presentation | James P. Fairbanks | Ramsey theorem for indecomposable matchings | Graph Theory at Georgia Tech (GT@GT) (Atlanta, GA) | |
| 2011 | Article | James Fairbanks | A Ramsey theorem for indecomposable matchings | arXiv preprint arXiv:1110.3314 |